M. Studeny, J. Vomlel: On open questions in the geometric approach to structural learning Bayesian nets. International Journal of Approximate Reasoning 52 (2011), n. 5, pp. 627-640.

Abstract
The basic idea of an algebraic approach to learning Bayesian network (BN) structures is to represent every BN structure by a certain uniquely determined vector, called the standard imset. In a recent paper (Studeny, Vomlel, Hemmecke 2010), it was shown that the set S of standard imsets is the set of vertices (= extreme points) of a certain polytope P and natural geometric neighborhood for standard imsets, and, consequently, for BN structures, was introduced. The new geometric view led to a series of open mathematical questions. In this paper, we try to answer some of them. First, we introduce a class of necessary linear constraints on standard imsets and formulate a conjecture that these constraints characterize the polytope P. The conjecture has been confirmed in the case of (at most) 4 variables. Second, we confirm a former hypothesis by Raymond Hemmecke that the only lattice points (= vectors having integers as components) within P are standard imsets. Third, we give a partial analysis of the geometric neighborhood in the case of 4 variables.

AMS classification 68T30, 62H05

Keywords
structural learning Bayesian nets
standard imset
polytope
geometric neighborhood
differential imset

A pdf version of the published paper (262kB) is already open-access available.
Moreover, an extension of that paper is a web page prepared by J. Vomlel, named The catalogue of types of geometric neighbors over four variables, in which all differential imsets (for standard imsets that are geometric neighbors) are classified. The output is in the form of a pdf file.

The paper builds on resuls from the following publications: